MOLECULAR REPRODUCTION AND DEVELOPMENT 73:153–163 (2006) Targeted Suppression of E-Cadherin Gene Expression in Bovine Preimplantation Embryo by RNA Interference Technology Using Double-Stranded RNA KORAKOT NGANVONGPANIT, HEIKE MÜLLER, FRANCA RINGS, MARKUS GILLES, DANYEL JENNEN, MICHAEL HÖLKER, ERNST THOLEN, KARL SCHELLANDER, AND DAWIT TESFAYE* Institute of Animal Science, Animal Breeding and Husbandry Group, University of Bonn, Endenicher Allee 15, Bonn, Germany ABSTRACT RNA interference (RNAi) has become acknowledged as an effective and useful tool to study gene function in diverse groups of cells. We aimed to suppress the expression of the E-cadherin gene during in vitro development of bovine preimplantation embryos using RNAi approach. In this experiment the effect of microinjection of E-cadherin and Oct-4 (as control) double-stranded (ds) RNA on the mRNA and protein expression level of the target E-cadherin gene was investigated. For this, a 496 bp long bovine E-cadherin and 341 bp long Oct-4 dsRNA sample were prepared using in vitro transcription. In vitro produced bovine zygotes were categorized into four treatment groups including those injected with E-cadherin dsRNA, Oct-4 dsRNA, RNase-free water, and uninjected controls. While the injection of E-cadherin dsRNA resulted in the reduction of E-cadherin mRNA and protein levels at the morula and blastocyst stage, the transcript and protein product remained unaffected in the Oct-4 dsRNA, water injected and uninjected control groups. The relative abundance of E-cadherin mRNA in the E-cadherin dsRNA injected morula stage embryos was reduced by 80% compared to the control group (P < 0.05). The Western blot analysis also showed a significant decrease in the E-cadherin protein (119 kDa) in E-cadherin dsRNA injected embryos compared to the other three groups. Microinjection of E-cadherin dsRNA has resulted only 22% blastocyst rate compared to 38%–40% in water injected and uninjected controls. In conclusion, our results indicated the suppression of E-cadherin mRNA and protein has resulted in lower blastocyst rate and the RNAi technology is a promising approach to study the function of genes in early bovine embryogenesis. Mol. Reprod. Dev. 73: 153–163, 2006. ß 2005 Wiley-Liss, Inc. Key Words: RNA interference; bovine embryo; E-cadherin gene INTRODUCTION Despite the fact that the bovine genome has been recently reported to be completely sequenced, the ß 2005 WILEY-LISS, INC. function of most of genes is not yet known. Till recently, the function of a specific gene in bovine species has been predicted using knockout experiments conducted in mouse (Larue et al., 1994; Riethmacher et al., 1995). However, these knockout technologies are extremely laborious and need long time to see the effects. To overcome this, the RNA interference (RNAi) approach through introduction of sequence specific doublestranded (ds) RNA into the cells has been reported for the first time in Caenorhabditis elegans (C. elegans) as an effective tool to study gene function in this species (Fire et al., 1998). Due to its relatively easy system to under take and effectiveness, this technique has been used to study gene function during early embryogenesis in mammalian species including mouse (Svoboda et al., 2000; Wianny and Zernicka-Goetz, 2000; Grabarek et al., 2002; Kim et al., 2002; Stein et al., 2003), pig (Cabot and Prather, 2003) and most recently in bovine (Paradis et al., 2005). The RNAi approach involves cellular regulatory mechanisms, which is known to be highly conserved process, and interferes or limits the transcript level by either suppressing transcription (transcriptional gene silencing; TGS) or by activating a sequence-specific RNA degradation process (post transcriptional gene silencing; PTGS). During this process, dsRNA molecules cleave the inducer molecule into small pieces first (Bender, 2001; Svoboda, 2004) and eventually destroy the cellular mRNA molecules, which are called the target (Bernstein et al., 2001). However, the application of RNAi in oocytes and preimplantation embryos is limited to some studies in mouse (Svoboda et al., 2000; Wianny and Zernicka-Goetz, 2000; Grabarek et al., 2002; Kim et al., 2002; Stein et al., 2003; Haraguchi et al., 2004; Lazar et al., 2004; Gui and Joyce, 2005). The first *Correspondence to: Dawit Tesfaye, PhD, Institute of Animal Science, University of Bonn, Endenicher Allee 15, Bonn, Germany. E-mail: [email protected] Received 5 July 2005; Accepted 11 September 2005 Published online 25 October 2005 in Wiley InterScience (www.interscience.wiley.com). DOI 10.1002/mrd.20406 154 K. NGANVONGPANIT ET AL. report on the possibility of using RNAi to study gene function in bovine oocytes has been recently reported by Paradis et al. (2005), where Cyclin B1 gene was targeted to suppress. Their result showed injection of Cyclin B1 dsRNA resulted in 90% reduction in the amount of Cyclin B1 mRNA and subsequent reduction in Cyclin B1 protein synthesis. To the best of our knowledge this study will be the second reporting the application of RNAi technology in bovine embryos. Blastocyst formation initiated at compaction and represented by cell polarization and the onset of cellular differentiation (Pratt et al., 1982) is mediated by fluid transfer across the intercellular connections between the outer blastomeres. During subsequent cavitation, the blastomeres differentiate into trophectoderm (TE) and inner cell mass (ICM) cells. In the bovine embryo, compaction occurs around the 16- to 32-cell stage (Betteridge and Fléchon, 1988) and is dependent on the expression of genes regulating cell adhesion and TE differentiation (Watson et al., 1999). Perturbations in the expression of genes involved in compaction and cavitation have been observed in in vitro-produced bovine morulae and blastocysts compared with their in vivo counterparts (Wrenzycki et al., 1996, 2001). Ecadherin-mediated cell-to-cell adhesion is associated with compaction (Pratt et al., 1982; Fleming et al., 1984) and transcript and protein are reported to be found in the ICM and TE of expanded bovine blastocysts (Shehu et al., 1996; Barcroft et al., 1998). Mouse knockout experiments have shown that E-cadherin null mutants have never formed normal blastocysts (Larue et al., 1994; Riethmacher et al., 1995). Similarly, the injection of E-cadherin dsRNA to the mouse zygote have resulted in dramatic reduction in mRNA, protein expression and perturbs the development of the injected embryos (Wianny and Zernicka-Goetz, 2000). Despite the pre- dicted role of E-cadherin in the process of compaction, no information is available on the effect of suppression of this transcript in the developmental potential of embryos in bovine. Therefore, in the present study we aimed to target the bovine E-cadherin gene using microinjection of sequence specific dsRNA at the zygote stage and monitor its effect on the mRNA and protein expression pattern and the developmental potential of bovine embryos during the later stages. MATERIALS AND METHODS Synthesis of DNA Template For E-cadherin and Oct-4 amplification, pair of primers were designed according to bovine cDNA sequence found in GenBank (see Table 1 for details) using Primer Express1 Software v2.0 (Applied Biosystems, Foster City, CA). These primers generated a PCR amplicon corresponding to coding sequence and the identity of the product was confirmed by sequencing. The first round of PCR amplification was performed using Taq DNA polymerase (Sigma, St. Louis, MO). At first, the sample was heated at 958C for 5 min followed by 35 cycles of denaturing at 948C for 30 sec, annealing at temperatures as indicated in Table 1 for 30 sec and extension at 728C for 1 min Following the last cycle, a 10 min elongation step at 728C was performed. The same PCR conditions have also been used for the second round of PCR amplification using T7 promoter (GTAATACGACTCACTATAGGG) attached to the 50 -end of each primer to generate two different templates for in vitro transcription to produce sense and antisense RNA strands. These E-cadherin and Oct-4 specific templates were purified using the QIAquick PCR Purification Kit (Qiagen, Hilden, Germany). TABLE 1. Details of Primers Used for dsRNA Preparation and Quantitative Real-Time PCR GenBank accession number Gene E-cadherina,c AY508164 E-cadherinb AY508164 OCT-4a,c AY490804 OCT-4b AY490804 b-cateninc Desmocollin-2 Histone 2ac a BT020888 c M81190 NM_178409 Primer sequences 50 -GTACACCTTCATCGTCCAGAGCTAA-30 50 -GCTCTTCAATGGCTTGTCCATTTGA-30 50 -GTAATACGACTCACTATAGGGGTACACCTTCATCGTCCAGAGCTAA-30 50 -GTAATACGACTCACTATAGGGGCTCTTCAATGGCTTGTCCATTTGA-30 50 -CCCAGGACATCAAAGCTCTTCAG-30 50 -GAACATGCTCTCCAGGTTGCCT-30 50 -GTAATACGACTCACTATAGGGCCCAGGACATCAAAGCTCTTCAG-30 50 -GTAATACGACTCACTATAGGGGAACATGCTCTCCAGGTTGCCT-30 50 -ATTCAGCAGAAGGTCCGAGTGC -30 50 -GTTGAAGCTACTGCCTCCGGTC-30 50 -CGCAACAACTCCGGATGGATAT-30 50 -GGTGGGTAATGCTGGAAACTGC-30 50 -CTCGTCACTTGCAACTTGCTATTC-30 50 -CCAGGCATCCTTTAGACAGTCTTC-30 Primers used for dsRNA preparation. Primer coupled with T7 promoter used for dsDNA template amplification. c Primer used for quantitative real time PCR. b Annealing temperature (8C) Product size (bp) 60 496 60 341 60 208 60 238 60 148 RNA INTERFERENCE IN BOVINE EMBRYO Synthesis of dsRNA The dsDNA templates coupled with T7 promoter were in vitro transcribed using RiboMAXTM large scale RNA Production T7 Systems (Promega, Madison) by which sense and antisense strands were transcribed from DNA template in the same reaction (Amdam et al., 2003). After in vitro transcription, the DNA template was removed by digestion with RNase-free DNase at 378C for 15 min. Subsequently, the annealing of sense and antisense RNA strands was performed by incubating the reaction at 378C for 4 hr after heating to 688C for 4 min to produce the dsRNA (Wianny and Zernicka-Goetz, 2000). Following a phenol/chloroform extraction, the RNA was precipitated with 0.1 volume of 3 M sodium acetate (pH 5.2) and 2.5 volume of 100% ethanol. After centrifugation at 15,000 rpm at 48C for 30 min, the resulting pellets were washed with 70% ethanol. Finally, the dsRNA pellets were resuspended in 10 ml diethylpyrocarbonat (DEPC) treated water. The RNA concentration was measured by ultraviolet light absorbance using Ultraspec 2100 pro spectrophotometer (Amersham Biosciences, Buckinghamshire, UK). Both E-cadherin and Oct4 dsRNA were diluted in DEPC treated water to obtain a final concentration of 25 mg/ml and stored at 808C until further use. Two microliters of the dsRNA and the corresponding dsDNA template were resolved by electrophoresis on a 2% agarose gel to evaluate the size and purity of the dsRNA (Fig. 1). Recovery of Oocytes Bovine ovaries were obtained from a local slaughter house and transported to the laboratory in a thermoflask containing a 0.9% saline solution supplemented with streptocombin. The cumulus-oocyte complexes (COCs) were aspirated from follicles (2–8 mm in diameter) with a 18-gauge needle and COCs with multiple layer of cumulus cells were selected for in vitro maturation. The selected oocytes were washed in maturation medium (MPM, modified Parker medium) supplemented with 15% estrus cow serum (OCS), 0.5 mM L-glutamine, Fig. 1. Two percent agarose gel stained with ethidium bromide showing the generation of E-cadherin (496 bp) and Oct-4 (341 bp) dsRNA compared with DNA template used for in vitro transcription. 155 0.2 mM pyruvate, 50 mg/ml gentamycin sulfate, and 10 ml/ml FSH (Folltropin, Vetrepharm, Canada) before set into culture. The COCs were cultured in groups of 50 in 400 ml of maturation medium under mineral oil in four-well dishes (Nunc, Roskilde, Denmark). Maturation was performed for 24 hr at 398C under a humidified atmosphere of 5% CO2 in air. In Vitro Fertilization of Oocytes After maturation, COCs were transferred into fourwell dishes containing 400 ml of fertilization medium (Fert-TALP) supplemented with 2 mg/ml of heparin (Sigma), 0.2 mM pyruvate (Sigma) and 25 ml/ml penicillinamine, hypotaurine, adrenaline (epinephrine) (PHE). A swim-up procedure has been applied to obtain motile sperm cell from frozen-thawed semen (Parrish et al., 1988). Briefly, frozen-thawed sperm cells were incubated in a tube containing 1.5 ml of sperm-TALP supplemented with 6 mg/ml BSA and 10 mM pyruvate for 50 min at 398C in a humidified incubator with 5% CO2. After this time, the supernatant was recovered and centrifuged at 250g for 10 min at room temperature to recover motile sperm cells as pellet. In vitro fertilization was performed using a final concentration of 2 106 sperm cells/ml in the fertilization drop containing a group of 50 COCs. Fertilization was initiated during coincubation of spermatozoa and the matured oocytes for 20 hr in the same incubator under the same temperature and atmospheric CO2 content as used for maturation. In Vitro Embryo Culture Following insemination, presumptive zygotes were stripped off from residual cumulus cells and attached spermatozoa by vortexing for 90 sec in CR1 culture medium. Zygotes were grouped into four groups namely: those to be injected with E-cadherin dsRNA, Oct-4 dsRNA, water, and uninjected controls. After treatment, zygotes were washed once in fresh culture medium and cultured in groups of up to 50 zygotes in four-well dishes each containing 400 ml CR1 medium (Rosenkranz and First, 1994) until day 7 after insemination. The CR1 medium is supplemented with 10% OCS, 20 ml/ml BME (amino acids), and 10 ml/ml MEM (nonessential amino acids) (Gibco BRL, Eggenstein, Germany). Cleavage rate was assessed 48 hr after insemination, while morula and blastocyst rate were determined at days 5 and 7 after insemination, respectively. In vitro culture was also performed in a humidified atmosphere with 5% CO2 at 398C. Microinjection of dsRNA Four groups of 40–50 zygotes were placed into injection medium [HEPES buffered tissue culture medium 199 (H-TCM199)] for injection with E-cadherin dsRNA (group 1), Oct-4 dsRNA (group 2), water (group 3), and uninjected controls (group 4). Microinjection was performed on an inverted microscope (Leica DM-IRB) at magnification 200. Zygotes to be injected were placed in a 10 ml droplet of H-TCM199 under mineral oil. 156 K. NGANVONGPANIT ET AL. Injection was performed by aspiration the dsRNA into the 5 mm diameter injection capillary (K-MPIP-3335-5, Cook, Ireland). The injection volume of 7 pl was estimated from the displacement of the minisque of mineral oil in the capillary. After injection all four groups of zygotes were washed twice in CR1aa medium and set back into culture. The zygotes were checked for survival 3–4 hr after injection. Embryo Collection Zygotes from all four groups were allowed to develop until day 7 postinsemination. Day 5 morula and day 7 blastocysts were used for mRNA transcript abundance and protein expression analysis using real time quantitative PCR and Western blotting, respectively. Prior to freezing, all embryos were washed two times with PBS (Sigma) and treated with acidic Tyrode pH 2.5–3 (Sigma) to dissolve the zona pellucida. The zona free embryos were further washed two times in drops of PBS and frozen in cryo tubes containing minimal amounts of lysis buffer [0.8% Igepal (Sigma), 40 U/ml RNasin (Promega), 5 mM dithiothreitol (DTT) (Promega)]. Embryos for Western blot analysis were additionally treated with protease inhibitor (Sigma). Until used for RNA isolation or Western blotting all frozen embryos were stored at 808C. RNA Isolation and Reverse Transcription A total of three pools of each containing 10 embryos were used for mRNA isolation using oligo(dT)26 attached magnetic beads (Dynal, Norway, Oslo) following manufacturers instruction. Briefly, embryos in lysis buffer were mixed with 40 ml binding buffer [20 mM Tris HCl with pH7.5, 1 M LiCl, 2 mM ethylenediaminetetraacetic acid (EDTA) with pH 8.0] and incubated at 658C for 5 min to obtain complete lysis of the embryo and release of RNA. Ten microlitres of oligo(dT)25 magnetic bead suspension was added to the samples, and incubated at room temperature for 30 min. The hybridized mRNA and Oligo(dT) magnetic beads were washed three times with washing buffer (10 mM Tris HCL with pH7.5, 0.15 mM LiCl, 1 mM EDTA with pH 8.0). Finally, mRNA samples were eluted in 12 ml DEPC-treated water and reverse transcribed in 20 ml reaction volume containing 2.5 mM oligo (dT)12 N (where: N ¼ G, A or C) primer, 4 ml of 5 first stand buffer (375 mM KCl, 15 mM MgCl2, 250 mM Tris-HCl pH 8.3), 2.5 mM of each dNTP, 10 U RNase inhibitor (Promega) and 100 U of SuperScript II reverse transcriptase (Invitrogen, Karlsruhe, Germany). In terms of the order of adding reaction components, mRNA and oligo(dT) primer were mixed first, heated to 708C for 3 min, and placed on ice until the addition of the remaining reaction components. The reaction was incubated at 428C for 90 min, and terminated by heat inactivation at 708C for 15 min. Quantitative Real-Time PCR Quantification of E-cadherin, Oct-4, and Histone 2a (H2a) mRNA in the embryos of each treatment group was assessed by real-time quantitative PCR. Moreover, two transcripts related to the embryo cell-to-cell adhesion (b-catenin and desmocilin II; DC-II) were quantified in all four treatment groups in order to determine the specificity of E-cadherin dsRNA to suppress the Ecadherin mRNA product. The ABI Prism1 7000 apparatus (Applied Biosystems) was used to perform the quantitative analysis using SYBR1 Green JumpStartTM Tag ReadyMixTM (Sigma) incorporation for dsDNAspecific fluorescent detection dye. Quantitative analyses of embryo E-cadherin, Oct-4, b-catenin, and DC-II cDNA were performed in comparison with H2a as an endogenous control (Robert et al., 2002), and were run in separate wells. PCR was performed by using 2 ml of each sample cDNA and specific primers which amplify, Ecadherin, Oct-4, b-catenin, DC-II, and H2a. The primer sequences were designed for PCR amplification according to the bovine cDNA sequence (Table 1) using Primer Express1 Software v2.0 (Applied Biosystems). Standard curves were generated for both target and endogenous control genes using serial dilution of plasmid DNA (101 –108 molecules). The PCRs were performed in 20 ml reaction volume containing of 10.2 ml SYBR1 Green universal master mix (Sigma) optimal levels of forward and reverse primers and 2 ml of embryonic cDNA. During each PCR reaction samples from the same cDNA source were run in duplicate to control the reproducibility of the results. A universal thermal cycling parameter (initial denaturation step at 958C for 10 min, 45 cycles of denaturation at 958C for 15 sec and 608C for 60 sec) were used to quantify each gene of interest. After the end of the last cycle, dissociation curve was generated by starting the fluorescence acquisition at 608C and taking measurements every 7 sec interval until the temperature reached 958C. Final quantitative analysis was done using the relative standard curve method as used in Tesfaye et al. (2004) and results are reported as the relative expression level compared to the calibrator cDNA after normalization of the transcript amount to the endogenous control. Western Blot Analysis Groups of 50 embryos at morula (day 5) and blastocyst (day 7) stage were used for each treatment group, which include E-cadherin dsRNA injected, Oct-4 dsRNA injected, water injected and uninjected zygotes. The proteins were extracted from the embryo in loading buffer (26% of Tris 1 M pH 6.8, 12% of SDS, 20% of 2-Mercaptoethanol, and 40% of Glycerol). Following boiling for 5 min, proteins were separated on a 10% SDS–PAGE gel. Proteins were then transferred onto nitrocellulose transfer membrane, pore size 0.45 mm (Protran1, Schleicher & Schuell BioScience, Germany) using Trans-Blot1 SD; Semi-Dry transfer Cell (Bio-Rad, CA, USA). The membrane was stained with Ponceau S to evaluate the transfer quality and blocked for 1 hr in Trisbuffered saline (20 mM Tris pH 7.5, 150 mM NaCl) containing 0.05% Tween-20 (TBS-T) and 1% Polyvinylpyrolidone (PVP) (Sigma). The membrane was then RNA INTERFERENCE IN BOVINE EMBRYO incubated at 48C overnight with the anti-rabbit E-cadherin primary antibody (Dunn Labotechnik, Germany). The primary antibody was diluted 1:500 in TBS-T containing 0.1% PVP prior to use. After incubation with the primary antibody, the membrane was washed six times for 10 min in TBS-T and the hybridization with the secondary antibody was performed at room temperature for 1 hr. The secondary antibody, horseradish-peroxidase-conjugated donkey anti-rabbit secondary antibody (Amersham Bioscience, UK), was diluted 1:50,000 in TBS-T containing 0.1% PVP. The membrane was finally washed six times for 10 min in TBS-T. The peroxidase activity was detected using the ECL Plus Western Blotting Detection System (Amersham Biosciencs) following the manufacturer’s instructions and visualized using Kodak BioMax XAR film (Kodak, Japan). Statistical Analysis The mRNA expression analysis for studied genes in all treatment groups and the bovine preimplantation embryos was analyzed based on the relative standard curve method. The relative expression data were analyzed using the Statistical Analysis System (SAS) version 8.0 (SAS Institute, Inc., NC) software package. Differences in mean values between two or more experimental groups or developmental stages were tested using ANOVA followed by a multiple pairwise comparisons 157 using t-test. Differences of P 0.05 were considered to be significant. RESULTS Temporal Expression Pattern of E-Cadherin, Oct-4, b-Catenin and Desmocolin II Transcripts Temporal expression pattern of all four transcripts namely: E-cadherin, Oct-4, b-catenin, and DC-II, has been observed during quantification throughout the preimplantation developmental stages of in vitro-produced bovine embryos (Fig. 2). The E-cadherin mRNA transcript was detected at higher level at immature and matured oocytes and morula and blastocyts stages of development. However, transcript abundance was lower between 2-cell and 16-cell developmental stages. The Oct-4 transcript was found to be highly abundant at early developmental stages (between immature oocytes and four-cell stages) and further down regulated between eight-cell and morula stages. Relatively higher transcript abundance was detected at the blastocyst stage. The expression pattern of b-catenin gene in in vitro bovine developmental embryos was highly abundant up to the four-cell stage and further down regulated in the later stages with a slight increase at the blastocyst stage. On the contrary, the transcript DC-II was not detected in earlier developmental stages upto the 16-cell stage but upregulated slightly at morula and highly at the blastocyst stage. Fig. 2. Relative abundance of E-cadherin, Oct-4, b-catenin, and DC-II mRNA in in vitro bovine preimplantation stage embryos, namely: (immature oocyte IM; mature oocytes MO; 2-cell 2C; 4-cell 4C; 8-cell 8C; 16-cell 16C; morula Mor; blastocyst Bla). The relative abundance of mRNA levels represents the amount of mRNA compared to the calibrator (16-cell stage) which is set as one. Individual bars show the treatment mean SD. Values with different superscripts (a,b,c,d,e,f,g) are significantly different (P ¼ 0.05). 158 K. NGANVONGPANIT ET AL. The Effect of dsRNA on Embryo Target mRNA Expression The results of this mRNA quantification in all four treatments groups show the injection of the E-cadherin dsRNA triggered the suppression in the amount of E-cadherin mRNA in the embryo. As shown in Figure 3, the relative expression level of E-cadherin mRNA at the morula stage was found to be reduced by 80% compared to the uninjected control group (P < 0.01) and 60% compared to water and Oct4 dsRNA injected group (P < 0.05). Similarly, the relative abundance of Ecadherin mRNA at the blastocyst stage was lower (P < 0.01) in the E-cadherin dsRNA injected embryos compared to the other three groups. As it is shown in Figure 3, the relative abundance of E-cadherin transcript was lower in both Oct-4 and water injected groups compared to uninjected control groups at both morula and blastocyst stages but these differences were not significant. This shows neither the injection of water nor Oct-4 dsRNA did significantly affect the expression of E-cadherin mRNA in both morula and blastocysts stages of embryo development. Moreover, quantitative expression analysis of Oct-4 mRNA in morula and blastocyst stages of the four treatment groups showed the significant effect of the Oct-4 dsRNA on the expression of the Oct-4 mRNA compared to the other treatment groups (Fig. 4). The expression of Oct-4 mRNA in Oct4 dsRNA treated group was downregulated by 56% at morula and 60% at blastocyst stages compared to the control group (P < 0.01), while no significant differences in Oct-4 mRNA were observed between uninjected controls, water injected and E-cadherin dsRNA injected embryo groups at both morula and blastocyst developmental stages. With the aim of investigating the specificity Ecadherin dsRNA in the suppression of the target mRNA, two functionally related transcripts (b-catenin and DC-II) and one housekeeping gene H2a were analyzed for their relative abundance at the blastocyst stages of all the four treatment groups as shown in Figure 5A–C. No significant differences (P > 0.05) were observed in Fig. 3. Relative abundance of E-cadherin mRNA at morula (A) and blastocyst stage (B) the four treatment groups. The relative abundance of mRNA levels represents the amount of mRNA compared to the calibrator (uninjected control), which is set as 1. Individual bars show the mean SD. Values with different superscripts (a,b) within each developmental stages (morula and blastocyst) are significantly different (P 0.05). Fig. 4. The relative abundance of Oct-4 mRNA at morula (A) and blastocyst stages (B) of embryos in all four treatment groups. The relative abundance of mRNA levels represents the amount of mRNA compared to the calibrator (uninjected control). Individual bars show the treatment mean SD. Values with different superscripts (a,b) within each developmental stages (morula and blastocyst) are significantly different (P 0.05). RNA INTERFERENCE IN BOVINE EMBRYO 159 Fig. 5. The relative abundance of H2a (A), b-catenin (B) and DC-II (C) transcripts at blastocyst stage in the four treatment groups. The relative abundance of mRNA levels represents the amount of mRNA compared to the calibrator (uninjected control). Individual bars show the treatment mean SD. the relative abundance of these three transcripts between the four embryo groups. Effect of E-cadherin dsRNA on Protein Expression To determine the effect of E-cadherin dsRNA on Ecadherin protein expression, Western blot analysis was performed using proteins extracted from the morula and blastocyst stages of the four treatment groups namely: embryos injected with E-cadherin dsRNA, Oct-4 dsRNA, water and uninjected controls (Fig. 6). Moreover, in vitro-produced bovine zygote stage embryos before any treatment were used to assess maternal produced E-cadherin protein. As shown in Figure 6 below there is a dramatic decrease in the intensity of E-cadherin protein band (119 kDa), while the E-cadherin protein band in Oct-4 dsRNA and water injected groups were similar with uninjected controls and zygote stage embryos. Injection of Oct-4 dsRNA and water did not affect the amount of E-cadherin protein, which is similar with the amount of E-cadherin protein present in uninjected control groups. Moreover, the E-cadherin protein expression at both morula and blastocyst stage were lower in E-cadherin dsRNA injected embryos compared to maternal protein in the newly fertilized zygotes before any microinjection. Phenotype Assessment Following Microinjection of dsRNA The survival rate of the embryos due to injury during microinjection has been determined 3–4 hr after microinjection. As it is indicated in Table 2, 15%–20% of the zygotes did not survive the microinjection procedure due to physical injuries. Within the injected zygote groups those injected with Oct-4 dsRNA had a Fig. 6. Western blot analysis for the presence of E-cadherin protein (119 kDa) in bovine embryo at morula and blastocyst stage following Oct-4 dsRNA injected, water injected, E-cadherin dsRNA injected compared to uninjected control and zygote stage embryos prior to microinjection. (For each treatment, pools of 75 embryos were used from 3 replicates). 160 K. NGANVONGPANIT ET AL. TABLE 2. The Phenotypes of Embryo Development Following Treatment With E-cadherin dsRNA, Oct-4 dsRNA, and Water Compared to the Uninjected Controls Treatment E-cad dsRNA inj. Oct4 dsRNA inj. Water inj. Uninj. control Number of Survival rate of embryos First cleavage embryos after microinjection rate 307 308 326 322 76.64 10.30a 81.80 19.03a,b 74.86 21.23a 98.19 3.03b 71.79 12.57a 69.94 22.69a 81.15 4.72b 81.94 4.12b Compacted morula rate 29.29 7.47a 30.62 11.54a,b 40.21 7.83b 38.07 5.72b Blastocyst rate after Blastocyst/ cavity formation morula ratio 22.56 9.14a 24.90 16.50a,b 39.77 6.82b 37.57 6.82b 0.77 0.81 0.99 0.99 The difference letter superscripts mean significant difference in same column (P ¼ 0.05). better survival rate after microinjection compared to the E-cadherin dsRNA injected and water injected ones. Only those embryos, which survived the microinjection procedure were considered for further developmental data collection. Higher first cleavage rate were observed in water injected and uninjected controls compared to those injected with E-cadherin and Oct-4 dsRNA but these differences are not significant. The compacted morula and blastocyst rate of injected and uninjected controls were determined at day 5 and 7 post insemination, respectively. While 22% of E-cadherin and Oct-4 dsRNA injected embryos developed to the morula stage, 27% and 38% were able to reach the morula stage in water injected and in uninjected control groups, respectively. Similarly, lower percentage of the embryos injected with E-cadherin (22%) and Oct-4 (25%) dsRNA developed to the blastocyst stage forming blastocoel cavity, while 39% and 37% of the embryos injected with water and uninjected controls, respectively developed to the blastocyst stage. The blastocyst:morula ratio results showed that only 77% and 81% of the compacted morula developed to the blastocyts stage by forming cavitation in E-cadherin and Oct-4 dsRNA injected embryos, respectively. However, about 99% of the morula have developed to the blastocyst stage in water injected and uninjected control groups. DISCUSSION In this study, we have demonstrated that the introduction of dsRNA into bovine embryos at zygote stage induced sequence-specific suppression of target mRNA and lead to post-transcriptional silencing of gene expression. The efficient introduction of dsRNA is an important step in getting successful suppression of transcripts through RNAi. In the present study, microinjection was the technique used to introduce dsRNA into the embryo. This system has the advantage of being relatively easy and allows for better control of the amount of dsRNA introduced into the embryo (Svoboda et al., 2000; Wianny and Zernicka-Goetz, 2000; Paradis et al., 2005), compared with electroporation (Grabarek et al., 2002) and transfection technique (Siddall et al., 2002). However, after microinjection embryos are subjected to a physical injury or stress and some die following injection. This was evidenced by 10% lower survival rate for microinjected embryos irrespective of the material injected, compared to the uninjected controls. Since the effect of microinjection on the survival of the embryos after injection was similar over the whole injected groups either with dsRNA or water, influences by physical injuries during further development were ruled out. RNAi has been demonstrated to act by either inducing degradation of the targeted RNA or inhibiting its translation, which leads to the loss of function in various mammalian embryo including mouse (Wianny and Zernicka-Goetz, 2000; Kim et al., 2002) and pig (Cabot and Prather, 2003). Our results also showed that the injection of E-cadherin dsRNA resulted in 80% reduction in the amount of E-cadherin mRNA. These results are comparable with the results obtained with mouse oocytes, where a suppression of 80% of Mos and 90% of Plat mRNA was achieved (Svoboda et al., 2000) and also in bovine oocytes, where injection of Cyclin B1 dsRNA has resulted in 90% suppression of Cyclin B1 mRNA (Paradis et al., 2005). In order to investigate the specificity of the E-cadherin dsRNA to suppress the E-cadherin mRNA, two functionally related transcripts (b-catenin and DC-II) and one housekeeping gene (H2a) were also quantified at blastocyst stage of the four treatment groups. Our results have demonstrated that the injection of E-cadherin dsRNA leads to the specific degradation of the E-cadherin mRNA with out affecting the expression of the other functionally related transcripts (b-catenin and DC-II) and the housekeeping gene studied in this experiment. Moreover, the injection of Ecadherin dsRNA had no effect on the relative abundance of Oct-4 transcript in all four treatment groups. On the other hand, the injection of Oct-4 targeted dsRNA resulted in degradation of the Oct-4 mRNA without affecting the level of E-cadherin transcript in both morula and blastocyst stages compared to uninjected controls. These results are consistent with the results obtained in bovine oocytes, where the injection of Cyclin B1 dsRNA has led to degradation of the Cycline B1 mRNA without affecting the mRNA of the housekeeping gene b-actin and Cycline B2, as member of the Cycline B family (Paradis et al., 2005). Similar results were also obtained in the mouse, where the injections of dsRNA directed toward either Mos or Plat mRNA resulted in the suppression of the targeted mRNA without affecting the untargeted transcript abundance (Svoboda et al., 2000). Our results together with others (Paradis et al., 2005) indicated that the machinery for RNAi-mediated degradation of targeted mRNA is available and functions in bovine oocytes and embryos. RNA INTERFERENCE IN BOVINE EMBRYO By injection of E-cadherin dsRNA at the zygote stage we could only degrade the mRNA and disrupt the protein synthesis from the embryonic genome. As it is indicated in Figure 6, injection E-cadherin dsRNA has resulted in the reduction of E-cadherin protein expression at morula and blastocyst stages compared to the Oct-4 dsRNA and water injected and uninjected controls. Moreover, the level of E-cadherin protein at morula and blastocyst stages in embryos injected with E-cadherin dsRNA was lower than in the newly fertilized zygotes before injection. This residual Ecadherin protein in E-cadherin dsRNA injected embryos may show persistence of maternally expressed protein. These results are consistent with the observation made by Wianny and Zernicka-Goetz (2000) in mouse, where E-cadherin residues have been detected in at morula stage embryos injected with E-cadherin dsRNA. Our immunoblotting results have also showed there is a decrease in the amount of residual E-cadherin protein detected at the blastocyst stage compared to the amount detected at the morula stage. In order to get insight into the expression profile of genes studied in this study, quantitative real time PCR was performed throughout the preimplantation developmental stages of in vitro-produced bovine embryos. E-cadherin transcript as both maternal and embryonic transcript was detected at immature and matured oocytes stages and after the activation of embryonic genome at morula and blastocyst stages. Similarly, Oct4 transcript was detected at higher level in all developmental stages except minimum transcript abundance between eight-cell and morula stages. Both b-catenin and DC-II transcripts have shown a temporal expression pattern throughout the preimplantation developmental stages. From their expression pattern it is possible to suggest that b-catenin is activated from both maternal and embryonic genome, while DC-II is derived solely from the embryonic genome. Previous studies on the mRNA expression of E-cadherin and b-catenin in bovine preimplantation embryos showed that transcripts were abundant in all stages of development (Barcroft et al., 1998). In the same study, immunohistological localization of the E-cadherin and b-catenin protein products showed that they are evenly distributed around the cell margins of one cell zygotes and cleavage stage embryos. Except some semi-quantitative RT-PCR analysis of E-cadherin and Oct-4 gene expression between bovine IVP and nuclear transfer embryos (Park et al., 2004) and E-cadherin and b-catenin (Barcroft et al., 1998) to the best of our knowledge this study is the first to show the real-time quantitative expression profile of these transcripts throughout the preimplantation stages of in vitro produced bovine embryos. Blastocyst formation initiated at compaction and represented by cell polarization and the onset of cellular differentiation (Pratt et al., 1982) is mediated by fluid transfer across the intercellular connections between the outer blastomeres. In the bovine embryo, compaction occurs around the 16- to 32-cell stage (Betteridge 161 and Fléchon, 1988) and is dependent on the stage specific expression of genes controlling cell adhesion and TE differentiation (Watson et al., 1999). Remodeling of E-cadherin-b-catenin-a-catenin complexes is required for the rearranging of cadherin-mediated cell–cell adhesion, the grouping of cells into appropriate structures, and cell migration (MacNeill, 2000). Removal in the mouse oocyte of the N-terminal part of b-catenin, containing the binding site for a-catenin and a part of the binding site for E-cadherin, eliminates blastomere adhesion (de Vries et al., 2004). In the present study, various phenotypical data were collected to investigate the effect of E-cadherin dsRNA injection on further developmental potential of the embryos. Significant number of zygotes, about 15%–20%, did not survive the microinjection procedure due to physical injuries exerted compared to the noninjected groups. Despite this microninjection technique is found to be a relatively easy technique and allows a better control of the amount of dsRNA injected into each embryo. Even though it is still significantly lower than the noninjected groups, zygotes in Oct-4 dsRNA injected group had higher survival rate than those from E-cadherin dsRNA and water injected groups. These variations in the survival of zygotes after microinjection between the three injected groups may be due to the variation in the structure of zygotes to withstand any physical injury during microinjected as in vitro produced oocytes and zygotes are heterogenous in their nature. To exclude the effect of these variations in determining the biological effect of dsRNA on the developmental potential of embryos, only embryos which survived the microinjection procedure were considered for phenotype data analysis. However, no significant differences were observed in the cleavage rate of zygotes survived in the four treatment groups. Significantly lower morula and blastocyst rate was observed in E-cadherin and Oct-4 dsRNA injected embryos compared to the water injected and uninjected controls. Taking the proportion of morula to blastocysts, only 77%–81% of the morula from E-cadherin and Oct-4 dsRNA injected group developed to blastocyst stage, while almost all morula in water injected and uninjected controls developed to blastocyst stage. Similar observations were also made in mouse embryos injected with E-cadherin dsRNA, where embryos developed normally until the compacted morula stage but 70% of these have never formed cavity to develop to blastocyst stage (Wianny and ZernickaGoetz, 2000). This was consistent with the observation of studies conducted with E-cadherin null mutant embryos (Larue et al., 1994; Riethmacher et al., 1995). Oct-4 is the earliest expressed transcription factor that is known to be crucial in murine preimplantation development (Okamoto et al., 1990; Schöler et al., 1990; Rosner et al., 1990). The mRNA and protein of Oct-4 have been found in murine oocytes and in the nuclei of subsequent cleavage stage embryos (Schöler et al., 1990; Rosner et al., 1990; Palmieri et al., 1994), while in the expanded murine blastocyst stage both mRNA and protein were predominantly found in the ICM (Palmieri 162 K. NGANVONGPANIT ET AL. et al., 1994; Pesce et al., 1998; Kirshhof et al., 2000). However, even in fully expanded bovine and porcine blastocysts both ICM and TE cells were found to be positive for Oct-4 protein (Kirshhof et al., 2000). In the present study, the Oct-4 dsRNA, which is used as positive control, has resulted in an intermediate effect on the cleavage and blastocyst rate, that is, higher compared to the E-cadherin dsRNA injected and lower than water injected and noninjected control groups. This low blastocyst rate in Oct-4 dsRNA injected embryos compared to the water injected and noninjected controls can be associated on the one hand with the low cleavage rate, which may be resulted from degradation of maternal Oct-4 transcript supporting further cleavage of embryos by dsRNA. On the other hand this phenomenon could be due to unidentified effect of Oct-4 knockdown in bovine embryos on the expression and activity of other developmentally important transcripts as it has been observed in lower or non detectable level of FGF4 in Oct-4/ mouse blastocysts (Nichols et al., 1998). Moreover, recently, the expression level of various developmentally important transcripts was found to be altered in mouse embryos following Oct-4 expression knockdown using dsRNA (Shin et al., 2005). It has been established that maternal E-cadherin is present in all stage of mouse embryo (Sefton et al., 1992) and also, found on the cell surface of unfertilized and fertilized egg but it is not synthesized in these cells (Vestweber et al., 1987). Kawai et al. (2002) have shown the location of E-cadherin protein in embryos using a laser scanning confocal microscropy, where E-cadherin protein was distributed uniformly through the cell surface in normal two-cell embryos. Thus, this is likely that the E-cadherin protein functions in the compaction of the morula by cell-to-cell adhesion. As it is observed in our study and also in the study of Wianny and ZernickaGoetz (2000) that E-cadherin dsRNA injected embryos have developed normally to the compacted morulae stage due to the presence of maternal derived Ecadherin protein, which suffices for initial compaction of the morula (Riethmacher et al., 1995). Moreover, it has been demonstrated that the compaction is mediated by microfilaments, microtubules (Pratt et al., 1981; Winkel et al., 1990), intracellular Ca2þ (Pey et al., 1998), protein kinase C (Winkel et al., 1990; Ohsugi et al., 1993; Pauken and Capco, 1999) and E-cadherin (Vestweber et al., 1987; Takeichi, 1988). In this study, we inactivated only one compaction factor, E-cadherin gene which may not enough to result in complete loss of function due to possible compensation of its function by other functionally related proteins. Therefore, further study designs, which enable the suppression of mRNA and proteins of functionally related genes at a time, may induce a complete loss of function and increase the efficiency of application of RNAi technology for gene function analysis. 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